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Cerebrospinal fluid (CSF) proteomics : methods and protocols

Cerebrospinal fluid (CSF) proteomics : methods and protocols (Loan 1 times)

Material type
Personal Author
Santamaría, Enrique (Santamaría Martínez). Fernández-Irigoyen, Joaquín.
Title Statement
Cerebrospinal fluid (CSF) proteomics : methods and protocols / edited by Enrique Santamaría and Joaquín Fernández-Irigoyen.
Publication, Distribution, etc
New York :   Humana Press :   Springer,   c2019.  
Physical Medium
xv, 557 p. : ill. (some col.) ; 27 cm.
Series Statement
Methods in molecular biology,1064-3745 ; 2044
1493997068 9781493997053 (print) 9781493997060 (electronic bk.)
Bibliography, Etc. Note
Includes bibliographical references and index.
Subject Added Entry-Topical Term
Cerebrospinal fluid --Laboratory manuals. Proteomics --Laboratory manuals.
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020 ▼a 9781493997053 (print)
020 ▼a 9781493997060 (electronic bk.)
035 ▼a (OCoLC)1118691790 ▼z (OCoLC)1121483224 ▼z (OCoLC)1122183305
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090 ▼a 612.8042 ▼b C414
245 0 0 ▼a Cerebrospinal fluid (CSF) proteomics : ▼b methods and protocols / ▼c edited by Enrique Santamaría and Joaquín Fernández-Irigoyen.
246 3 ▼a Cerebrospinal fluid proteomics
260 ▼a New York : ▼b Humana Press : ▼b Springer, ▼c c2019.
300 ▼a xv, 557 p. : ▼b ill. (some col.) ; ▼c 27 cm.
490 1 ▼a Methods in molecular biology, ▼x 1064-3745 ; ▼v 2044
490 1 ▼a Springer protocols
504 ▼a Includes bibliographical references and index.
650 0 ▼a Cerebrospinal fluid ▼v Laboratory manuals.
650 0 ▼a Proteomics ▼v Laboratory manuals.
700 1 ▼a Santamaría, Enrique ▼q (Santamaría Martínez).
700 1 ▼a Fernández-Irigoyen, Joaquín.
830 0 ▼a Methods in molecular biology (Clifton, N.J.) ; ▼v v. 2044.
830 0 ▼a Springer protocols (Series).
945 ▼a KLPA

Holdings Information

No. Location Call Number Accession No. Availability Due Date Make a Reservation Service
No. 1 Location Science & Engineering Library/Sci-Info(Stacks2)/ Call Number 612.8042 C414 Accession No. 121251377 Availability Available Due Date Make a Reservation Service B M

Contents information

Table of Contents

Preface...Table of Contents...Contributing Authors...
Part I Introduction
1. The Human Brain Proteome Project: Biological and Technological ChallengesJoaquin Fernandez-Irigoyen, Fernando Corrales, and Enrique Santamaria
Part II Cerebrospinal Fluid Sample Preparation Methods for Proteomic Workflows
2. Guidelines for CSF Processing and Biobanking: Impact on the Identification and Development of Optimal CSF Protein BiomarkersYanaika S. Hok-a-Hin, Eline A. J. Willemse, Charlotte E. Teunissen, and Marta del Campo
3. Functional Analyses of Embryonic Cerebrospinal Fluid ProteinsTeresa Caprile, Francisco Lamus, Maria Isabel Alonso, Hernan Montecinos, and Angel Gato
4. CSF Sample Preparation for Data Independent AcquisitionKatalin Barkovits, Lars Toenges, and Katrin Marcus
5. Sample Fractionation Techniques for CSF Peptide Spectral Library GenerationSandra Pacharra, Katrin Marcus, and Caroline May
Part III Shotgun Cerebrospinal Fluid Proteomics
6. Application of 2D-DIGE and iTRAQ Workflows to Analyse CSF in Gliomas Aishwarya Rao, Kanika Mehta, Nikita Gahoi, and Sanjeeva Srivastava
7. Peptidomic Workflow Applied to Cerebrospinal Fluid AnalysisRustam H. Ziganshin, Sergey I. Kovalchuk, and Igor V. Azarkin
8. Quantitative Evaluation of Different Protein Fractions of Cerebrospinal Fluid using 18O Labeling Ramona Birke, Eberhard Krause, Michael Schumann, Ingolf E. Blasig, and Reiner F. Haseloff
9. A Versatile Workflow for Cerebrospinal Fluid Proteomic Analysis with Mass Spectrometry: A Matter of Choice between Deep Coverage and Sample ThroughputCharlotte Macron, Antonio Nunez Galindo, Ornella Cominetti, and Loic Dayon
10. Determination of Cerebrospinal Fluid Proteome Variations by Isobaric-Labeling Coupled to Strong Cation Exchange Chromatography and Tandem Mass-SpectrometryMercedes Lachen-Montes, Andrea Gonzalez-Morales, Joaquin Fernandez-Irigoyen, and Enrique Santamaria
11. SWATH Mass Spectrometry Applied to Cerebrospinal Fluid Differential Proteomics: Establishment of a Sample-Specific MethodSandra I. Anjo, Catia Santa, and Bruno Manadas
Part IV Cerebrospinal Fluid Subproteomics
12. Top-Down Proteomics Applied to Human CSFMarina Gay, Ester Sanchez-Jimenez, Laura Villarreal, Mar Vilanova, Romain Huguet, Gianluca Arauz-Garofalo, Mireia Diaz-Lobo, Daniel Lopez-Ferrer, and Marta Vilaseca
13. Application of an Aptamer-Based Proteomics Assay (SOMAscanTM) in Rat CSFAlba Simats, Laura Ramiro, Joan Montaner, and Teresa Garcia-Berrocoso
14. Monitoring the Cerebrospinal Fluid Cytokine Profile using Membrane-Based Antibody ArraysAndrea Gonzalez-Morales, Mercedes Lachen-Montes, Joaquin Fernandez-Irigoyen, and Enrique Santamaria
15. Selective and Sensitive Mass Spectrometric Identification of Immune Complexe Antigens in Cerebrospinal FluidNozomi Aibara and Kaname Ohyama
16. CSF N-glycoproteomics using MALDI MS Techniques in Neurodegenerative DiseasesAngela Messina, Angelo Palmigiano, Rosaria Ornella Bua, Donata Agata Romeo, Rita Barone, Luisa Sturiale, Mario Zappia, and Domenico Garozzo
17. Deployment of Label-Free Quantitative Olfactory Proteomics to Detect Cerebrospinal Fluid Biomarker Candidates in synucleinopathiesMercedes Lachen-Montes, Andrea Gonzalez-Morales, Joaquin Fernandez-Irigoyen, and Enrique Santamaria
18. An Improved Assay for Quantitation of Cerebrospinal Fluid Cystatin C using Liquid Chromatography Tandem Mass SpectrometryAbdullah Md Sheikh and Atsushi Nagai
19. Array-Based Profiling of Proteins and Autoantibody Repertoires in CSFElisa Pin, Ronald Sjoeberg, Eni Andersson, Cecilia Hellstroem, Jennie Olofsson, August Jernbom Falk, Sofia Bergstroem, Julia Remnestal, David Just, Peter Nilsson, and Anna Manberg
Part V Other -Omics Applied to Cerebrospinal Fluid
20. Untargeted Metabolomics Relative Quantification by SWATH Mass Spectrometry Applied to Cerebrospinal FluidVera M. Mendes, Margarida Coelho, and Bruno Manadas
21. Co-Extraction for Metabolomics and Proteomics from a Single CSF SamplePhilipp Hoermann, Katalin Barkovits, Katrin Marcus, and Karsten Hiller
22. Characterization of the Alzheimer''s Disease MicroRNA Profile in Exosome Enriched CSF SamplesJavier Riancho, Ana Santurtun, and Pascual Sanchez-Juan
23. Mass-Spectrometry Applied to Human Cerebrospinal Fluid LipidomeLaura Millan, Joaquin Fernandez-Irigoyen, Enrique Santamaria, and Rebeca Mayo
Part VI Bioinformatics Applied to Cerebrospinal Fluid
24. Trait Loci Mapping and CSF ProteomeDaimei Sasayama, Kotaro Hattori, and Hiroshi Kunugi
25. Essential Features and Use Cases of the Cerebrospinal Fluid Proteome Resource (CSF-PR)Astrid Guldbrandsen, Yehia Farag, Ragnhild Reehorst Lereim, Frode S. Berven, and Harald Barsnes
26. Bioinformatics to Tackle the Biological Meaning of Human Cerebrospinal Fluid ProteomeFabio Trindade, Rita Nogueira-Ferreira, Paulo Bastos, Francisco Amado, Rita Ferreira, and Rui Vitorino

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